BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008G05SP1|AL425920
(798 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1291 1582 0.0
>3x_Contig1291
Length = 6514
Score = 1582 bits (798), Expect = 0.0
Identities = 798/798 (100%)
Strand = Plus / Minus
Query: 1 tagagccgaattgtcgcagttatgtgcagtgcctttgcaaattgtgtccccacaatctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 tagagccgaattgtcgcagttatgtgcagtgcctttgcaaattgtgtccccacaatctaa 902
Query: 61 caaaccttgtatgggtattgtgcaggatacattatgtggtattcgtaaaatgactctaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 caaaccttgtatgggtattgtgcaggatacattatgtggtattcgtaaaatgactctaag 842
Query: 121 agacactttcatagaattggatcaagtgttgaatatgctttactggattcctgactggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 agacactttcatagaattggatcaagtgttgaatatgctttactggattcctgactggga 782
Query: 181 cggaattatccccactcctgcaatcttgaagccagtaccactatggtcgggtaagcaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cggaattatccccactcctgcaatcttgaagccagtaccactatggtcgggtaagcaagt 722
Query: 241 gctatccatggctattcctaatggtattcacttacaacgttttgatgatggaacaacttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gctatccatggctattcctaatggtattcacttacaacgttttgatgatggaacaacttt 662
Query: 301 cttatcaccaaaagacaatggtatgttgatcattgatggtaaaatcatttttggtgttgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cttatcaccaaaagacaatggtatgttgatcattgatggtaaaatcatttttggtgttgt 602
Query: 361 tgacaagaagaccgtcggttcatctagtggtggtttaatccacgtggttacgagagaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgacaagaagaccgtcggttcatctagtggtggtttaatccacgtggttacgagagaaaa 542
Query: 421 gggacctgaaatttgcgcaagactcttcagtaacatccaaaaggttgtcaattactggct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gggacctgaaatttgcgcaagactcttcagtaacatccaaaaggttgtcaattactggct 482
Query: 481 cttgcataatggtttctccattggtattggtgataccattgctgatgagaaaaccatgag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cttgcataatggtttctccattggtattggtgataccattgctgatgagaaaaccatgag 422
Query: 541 ggagattactgaagctatcgctgttgccaagaagaaggtcgaagatgtcacgaaagaggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggagattactgaagctatcgctgttgccaagaagaaggtcgaagatgtcacgaaagaggc 362
Query: 601 tcaagcgaacttattaacggcaaaacacggtatgacattgcgtgaatcgttcgaagataa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcaagcgaacttattaacggcaaaacacggtatgacattgcgtgaatcgttcgaagataa 302
Query: 661 tgtcgttcgttatctaaacgaagctagagataaagctggtcgttcagcagaagtcaactt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtcgttcgttatctaaacgaagctagagataaagctggtcgttcagcagaagtcaactt 242
Query: 721 gaaagatttaaataacgtcaagcagatggttagtgcggggtcgaagggttcctttattaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaagatttaaataacgtcaagcagatggttagtgcggggtcgaagggttcctttattaa 182
Query: 781 tatcgctcaaatgtctgc 798
||||||||||||||||||
Sbjct: 181 tatcgctcaaatgtctgc 164
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5325
Number of Sequences: 1807
Number of extensions: 5325
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 798
length of database: 10,358,551
effective HSP length: 16
effective length of query: 782
effective length of database: 10,329,639
effective search space: 8077777698
effective search space used: 8077777698
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)